CDS

Accession Number TCMCG051C21099
gbkey CDS
Protein Id XP_024458837.1
Location join(19449193..19449842,19450798..19450879,19451494..19451728,19451936..19452009,19452086..19452139)
Gene LOC112327891
GeneID 112327891
Organism Populus trichocarpa

Protein

Length 364aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024603069.1
Definition nuclear pore complex protein NUP43-like isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description Nucleoporin
KEGG_TC 1.l.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14305        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0031080        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAAGAACAAACCTTACAGAACCCCCCAAAATCCACAGAATCCCACAACCCAAATTCATTGACGCAATTCGCTGGCTCCCTTCTCCTTCCCCTTTTCGAAAATCCTTCATTTCCTCCCTCTTTGATTCGGATTTCCACACTCCTTCCCTCGAAATCCACTCTCTAGACCCTTCTAAAACCCTAACCACCCCACTCTTGTCCTGGACCCCACCTTCCCGTATTTCCTCTCTCAAATCCACTCCTTCCCTCTTCGCTGCCTCCACTTTCCTGGGTTCTCTCCACATTTTCAAAACGCCAGAGGAAATGTCGGTTTTGGGGAATGACATGTCGGGTTTGGGTGGTGAAACGTCGGTTATGGAACCTGTAGTGTCGGTTGTTGGCAGGGAGTTTCATGTGGGGTCCATTGGGGGTGTGGATTTGATGGAAGGAGGGAGTGAGTGTGTTAGTGTTGGAGAAGATGGGAGGGTTAATTTGGTTGTTGAGAAGGGAGGTTTTAGGAGGGTTTTTGATGGGAATGGATTGGTTTCATATTCGGCAGTTAAATGGGCTTCCCCGTCTGAGTTTGTGACTGGTGGATGTGGGTTTGGACTTCAGTGGTGGGACCTTAGACAGCCTGGTGCTGCCGTTGCTCAGTTTAAGGGTAGCTGCTTATGCTGTAGGGATCGTGGCACAACTTCTGGGATCATTCACTCCATTGATATCCATCCATCCCGTAAGCACACATGTCTGGCAGGAGGTTCATCAGGTACTGTATTTGCCTGGGATTTAAGAAGGCAACAAGAACCGATTATTCTTTCTTCAATTGGCTCTAGTGACACTATGACCCAACCATTATCTGAAAGCGAGGTTTGGGAAGTTCAATATGACTACTACACCAAGTCTTTGAATAGTAATATTTCATCATCGCGGATCTTACCTGCTATGATCTGCTCTGAAGATGGGATCCTTGCTGTCATTGAACAAGGTGAGGAACCCACTGAGCTCTTGGCTGAACCCTGTGCCATCAACAGCTTTGACATTGATCGCCAAAACCCCTCGGATGTAATATGTAGTTTGGAGTGGGAATCCATTGTCATTTTGTCAAGGCCGTAA
Protein:  
MARTNLTEPPKIHRIPQPKFIDAIRWLPSPSPFRKSFISSLFDSDFHTPSLEIHSLDPSKTLTTPLLSWTPPSRISSLKSTPSLFAASTFLGSLHIFKTPEEMSVLGNDMSGLGGETSVMEPVVSVVGREFHVGSIGGVDLMEGGSECVSVGEDGRVNLVVEKGGFRRVFDGNGLVSYSAVKWASPSEFVTGGCGFGLQWWDLRQPGAAVAQFKGSCLCCRDRGTTSGIIHSIDIHPSRKHTCLAGGSSGTVFAWDLRRQQEPIILSSIGSSDTMTQPLSESEVWEVQYDYYTKSLNSNISSSRILPAMICSEDGILAVIEQGEEPTELLAEPCAINSFDIDRQNPSDVICSLEWESIVILSRP